Statistical Methodological Publications:
Cressie, N., Zhu, J., Baddeley, A.J., and Nair, M.G. (2000). Directed Markov point processes
as limits of partially ordered Markov models. Methodology and Computing in Applied
Probability, 2, 5–21.
Zhu, J., Lahiri, S.N., and Cressie, N. (2002). Asymptotic inference for spatial CDFs over time.
Statistica Sinica, 12, 843–861.
Zhu, J., Eickhoff, J.C., and Kaiser, M.S. (2003). Modeling the dependence between number of
trials and success probability in a beta-binomial–Poisson mixture distribution. Biometrics,
Eickhoff, J.C., Zhu, J., and Amemiya, Y. (2004). On the simulation size and the convergence of
the Monte Carlo EM algorithm via likelihood-based distances. Statistics and Probability
Letters, 67, 161–171.
Zhu, J., Morgan, C.L.S., Norman, J.M., Yue, W., and Lowery, B. (2004). Combined mapping
of soil properties using a multi-scale tree-structured spatial model. Geoderma, 118, 321–
Zhu, J. and Morgan, G.D. (2004). Comparison of spatial variables over subregions using a
block bootstrap. Journal of Agricultural, Biological, and Environmental Statistics, 9,
Zhu, J. and Morgan, G.D. (2004). A nonparametric procedure for analyzing repeated-measures
of spatially correlated data. Environmental and Ecological Statistics, 11, 431–443.
Tracey, J.A., Zhu, J., and Crooks, K. (2005). A set of nonlinear regression models for animal
movement in response to a single landscape feature. Journal of Agricultural, Biological,
and Environmental Statistics, 10, 1–18.
Zhu, J., Eickhoff, J.C., and Yan, P. (2005). Generalized linear latent variable models for
repeated measures of spatially correlated multivariate data. Biometrics, 61, 674–683.
Zhu, J., Huang, H.-C., and Wu, J. (2005). Modeling spatial-temporal binary data using
Markov random fields. Journal of Agricultural, Biological, and Environmental Statistics,
Zhu, J. and Yue, W. (2005). A multiresolution tree-structured spatial linear model. Journal
of Computational and Graphical Statistics, 14, 168–184.
Ives, A.R. and Zhu, J. (2006). Statistics for correlated data: phylogenies, space, and time.
Ecological Applications, 16, 20–32.
Lahiri, S.N. and Zhu, J. (2006). Resampling methods for spatial regression models under a
class of stochastic designs. Annals of Statistics, 34, 1774–1813.
Yue, W. and Zhu, J. (2006). On estimation and prediction for multivariate multiresolution
tree-structured models. Statistica Sinica, 16, 981–1020.
Zhu, J. and Lahiri, S.N. (2007). Bootstrapping the empirical distribution function of a spatial
process. Statistical Inference for Stochastic Processes, 10, 107–145.
Rasmussen, J.G., Møller, J., Aukema, B.H., Raffa, K.F., and Zhu, J. (2007). Bayesian inference
for multivariate point processes observed at sparsely distributed times. Journal of
the Royal Statistical Society Series B, 69, 701–713.
Chi, G. and Zhu, J. (2008). Spatial regression models for demographic analysis. Population
Research and Policy Review, 27, 17–42.
Zheng, Y. and Zhu, J. (2008). Markov chain Monte Carlo for a spatial-temporal autologistic
regression model. Journal of Computational and Graphical Statistics, 17, 123–137.
Zheng, Y., Zhu, J., and Li, D. (2008). Analyzing spatial panel data of cigarette demand: A
Bayesian hierarchical modeling approach. Journal of Data Science, 6, 467–489.
Zhu, J., Rasmussen, J.G., Møller, J., Aukema, B.H., and Raffa, K.F. (2008). Spatial-temporal
modeling of forest gaps generated by colonization from below- and above-ground bark
beetle species. Journal of the American Statistical Association, 103, 162–177.
Zhu, J., Zheng, Y., Carroll, A.L., and Aukema, B.H. (2008). Autologistic regression analysis
of spatial-temporal binary data via Monte Carlo maximum likelihood. Journal of
Agricultural, Biological, and Environmental Statistics, 13, 84–98.
Wang, H. and Zhu, J. (2009). Variable selection in spatial regression via penalized least
squares. Canadian Journal of Statistics, 37, 607–624.
Zheng, Y., Zhu, J., and Roy, A. (2010). Nonparametric Bayesian inference for the spectral
density function of a random field. Biometrika, 97, 238–245.
Zhu, J., Huang, H.-C., and Reyes, P.E. (2010). On selection of spatial linear models for lattice
data. Journal of the Royal Statistical Society Series B, 72, 389–402.
Tracey, J.A., Zhu, J., and Crooks, K. (2011). Modeling and inference of animal movement
using artificial neural network. Environmental and Ecological Statatistics. Accepted for
Lin, F. and Zhu, J. (2011). Additive hazards regression and partial likelihood estimation for
ecological monitoring data. Statistics and Its Inference. Accepted for publication.
Morgan, G.D., MacGuidwin, A.E., Zhu, J., and Binning, L.K. (2002). Root lesion nematode
(Pratylenchus penetrans) population dynamics over a three-year crop rotation. Agronomy
Journal, 94, 1146–1155.
Morgan, G.D., Stevenson, W.R., MacGuidwin, A.E., Kelling, K.A., Binning, L.K., and Zhu,
J. (2002). Plant pathogen population dynamics in potato fields. Journal of Nematology,
Ingham, S.C., Vivio, L.L., Losinski, J.A., and Zhu, J. (2004). Manual shaking as an alternative
to mechanical stomaching in preparing ground meats for microbiological analysis. Food
Protection Trends, 24, 253–256.
Anderson, D.A., Turner, M.G., Forester, J.D., Zhu, J., Boyce, M.S., Beyer, H., and Stowell,
L. (2005). Scale-dependent summer habitat use for reintroduced elk (Cervus canadensis)
in Wisconsin, USA. Journal of Wildlife Management, 69, 298–310.
Ingham, S.C., Fanslau, M.A., Engel R., Breuer, J.R., Breuer, J.E., Wright, T.H., Reith-
Rozelle, J.K., and Zhu, J. (2005). Evaluation of fertilization-to-planting and fertilizationto-
harvest intervals for safe use of non-composted bovine manure in Wisconsin vegetable
production. Journal of Food Protection, 68, 1134–1142.
Ingham, S.C., Engel, R.A., Fanslau, M.A., Schoeller, E.L., Searls, G.A., Buege, D.R., and
Zhu, J. (2005). Fate of Staphylococcus aureus on vacuum-packaged ready-to-eat meat
products stored at 21oC. Journal of Food Protection, 68, 1911–1915.
Magle, S.B., Zhu, J., and Crooks, K. (2005). Behavioral responses to repeated human intrusion
by black-tailed prairie dogs (Cynomys Ludovicianus). Journal of Mammalogy, 86, 524–
Smithwick, E.A.H., Mack, M.C., Turner, M.G., Chapin III, F.S., Zhu, J., and Balser, T.C.
(2005). Spatial heterogeneity of ecosystem processes after severe fire in a black spruce
(Picea mariana) forest, Alaska. Biogeochemistry, 76, 517–537.
Aukema, B.H., Carroll, A.L., Zhu, J., Raffa, K.F., Sickley, T.A., and Taylor, S.W. (2006).
Landscape level analysis of mountain pine beetle in British Columbia, Canada: Spatiotemporal
development and spatial synchrony within the present outbreak. Ecography,
Algino, R.J., Ingham, S.C., and Zhu, J. (2007). Survey of antimicrobial effects of beef carcass
intervention treatments in very small state-inspected slaughter plants. Journal of Food
Science, 72, 173–179.
Ruby, J.R., Zhu, J., and Ingham, S.C. (2007). Using indicator bacteria and Salmonella spp.
test results from three large-scale beef abattoirs over an 18-month period to evaluate
intervention system efficacy and plan carcass testing for Salmonella spp. Journal of Food
Protection, 70, 2732–2740.
Vander-Zanden, M.J., Joppa, L.N., Allen, B.C., Chandra, S., Gilroy, D., Hogan, Z., Maxted,
J.T., and Zhu, J. (2007). Modeling spawning dates of Hucho taimen in Mongolia to
establish fishery management zones. Ecological Applications, 17, 2281–2289.
Aukema, B.H., Carroll, A.L., Zheng, Y., Zhu, J., Raffa, K.F., Moore, R.D., and Stahl, K.
(2008). Movement of outbreak populations of mountain pine beetle: Influence of spatiotemporal
patterns and climate. Ecography, 31, 348–358.
Mu˜noz, G.R., Kelling, K.A., Rylant, K.E., and Zhu, J. (2008) Field evaluation of nitrogen
availability from fresh and composted manure. Journal of Environmental Quality, 37,
Qin, X., Han, J., and Zhu, J. (2009). Spatial analysis of road weather safety data using a
Bayesian hierarchical modeling approach. Advances in Transportation Studies, 18, 69–
Aukema, B.H., Zhu, J., Møller, J., Rasmussen, J.G., and Raffa, K.F. (2010). Interactions
between below- and above-ground herbivores drive a forest decline and gap-forming syndrome.
Forest Ecology and Management, 259, 374–382.
Magle, S.B., Reyes, P., Zhu, J., and Crooks, K. (2010). Investigating local extinction, colonization, and habitat destruction for a keystone species in urban habitat. Biological
Conservation, 143, 2146-2155.
Zhu, J. (2006). Review of “Statistical Methods for Spatial Data Analysis” by O. Schabenberger
and C. A. Gotway. Journal of the American Statistical Association, 101, 389–390.