Statistical Methodology Publications:
Cressie, N., Zhu, J., Baddeley, A.J., and Nair, M.G. (2000). Directed Markov point processes as limits of partially ordered Markov models. Methodology and Computing in Applied Probability, 2, 5–21.
Zhu, J., Lahiri, S.N., and Cressie, N. (2002). Asymptotic inference for spatial CDFs over time. Statistica Sinica, 12, 843–861.
Zhu, J., Eickhoff, J.C., and Kaiser, M.S. (2003). Modeling the dependence between number of trials and success probability in a beta-binomial–Poisson mixture distribution. Biometrics, 59, 957–963.
Eickhoff, J.C., Zhu, J., and Amemiya, Y. (2004). On the simulation size and the convergence of the Monte Carlo EM algorithm via likelihood-based distances. Statistics and Probability Letters, 67, 161–171.
Zhu, J., Morgan, C.L.S., Norman, J.M., Yue, W., and Lowery, B. (2004). Combined mapping of soil properties using a multi-scale tree-structured spatial model. Geoderma, 118, 321–334.
Zhu, J. and Morgan, G.D. (2004). Comparison of spatial variables over subregions using a block bootstrap. Journal of Agricultural, Biological, and Environmental Statistics, 9, 91–104.
Zhu, J. and Morgan, G.D. (2004). A nonparametric procedure for analyzing repeated-measures of spatially correlated data. Environmental and Ecological Statistics, 11, 431–443.
Tracey, J.A., Zhu, J., and Crooks, K. (2005). A set of nonlinear regression models for animal movement in response to a single landscape feature. Journal of Agricultural, Biological, and Environmental Statistics, 10, 1–18.
Zhu, J., Eickhoff, J.C., and Yan, P. (2005). Generalized linear latent variable models for repeated measures of spatially correlated multivariate data. Biometrics, 61, 674–683.
Zhu, J., Huang, H.-C., and Wu, J. (2005). Modeling spatial-temporal binary data using Markov random fields. Journal of Agricultural, Biological, and Environmental Statistics, 10, 212–225.
Zhu, J. and Yue, W. (2005). A multiresolution tree-structured spatial linear model. Journal of Computational and Graphical Statistics, 14, 168–184.
Ives, A.R. and Zhu, J. (2006). Statistics for correlated data: phylogenies, space, and time. Ecological Applications, 16, 20–32.
Lahiri, S.N. and Zhu, J. (2006). Resampling methods for spatial regression models under a class of stochastic designs. Annals of Statistics, 34, 1774–1813.
Yue, W. and Zhu, J. (2006). On estimation and prediction for multivariate multiresolution tree-structured models. Statistica Sinica, 16, 981–1020.
Zhu, J. and Lahiri, S.N. (2007). Bootstrapping the empirical distribution function of a spatial process. Statistical Inference for Stochastic Processes, 10, 107–145.
Rasmussen, J.G., Møller, J., Aukema, B.H., Raffa, K.F., and Zhu, J. (2007). Bayesian inference for multivariate point processes observed at sparsely distributed times. Journal of the Royal Statistical Society Series B, 69, 701–713.
Chi, G. and Zhu, J. (2008). Spatial regression models for demographic analysis. Population Research and Policy Review, 27, 17–42.
Zheng, Y. and Zhu, J. (2008). Markov chain Monte Carlo for a spatial-temporal autologistic regression model. Journal of Computational and Graphical Statistics, 17, 123–137.
Zheng, Y., Zhu, J., and Li, D. (2008). Analyzing spatial panel data of cigarette demand: A Bayesian hierarchical modeling approach. Journal of Data Science, 6, 467–489.
Zhu, J., Rasmussen, J.G., Møller, J., Aukema, B.H., and Raffa, K.F. (2008). Spatial-temporal modeling of forest gaps generated by colonization from below- and above-ground bark beetle species. Journal of the American Statistical Association, 103, 162–177.
Zhu, J., Zheng, Y., Carroll, A.L., and Aukema, B.H. (2008). Autologistic regression analysis of spatial-temporal binary data via Monte Carlo maximum likelihood. Journal of Agricultural, Biological, and Environmental Statistics, 13, 84–98.
Wang, H. and Zhu, J. (2009). Variable selection in spatial regression via penalized least squares. Canadian Journal of Statistics, 37, 607–624.
Zheng, Y., Zhu, J., and Roy, A. (2010). Nonparametric Bayesian inference for the spectral density function of a random field. Biometrika, 97, 238–245.
Zhu, J., Huang, H.-C., and Reyes, P.E. (2010). On selection of spatial linear models for lattice data. Journal of the Royal Statistical Society Series B, 72, 389–402.
Chu, T., Zhu, J., and Wang, H. (2011). Penalized maximum likelihood estimation and variable selection in geostatistics. Annals of Statistics, 39, 2607-2625.
Tracey, J.A., Zhu, J., and Crooks, K.R. (2011). Modeling and inference of animal movement using artificial neural network. Environmental and Ecological Statistics, 18, 393-410.
Zheng, Y. and Zhu, J. (2012). On the asymptotics of maximum likelihood estimation for spatial linear models on a lattice. Sankhya Series A, 74, 29-56.
Lin, F. and Zhu, J. (2012). Additive hazards regression and partial likelihood estimation for ecological monitoring data across space. Statistics and Its Inference, 5, 195-206.
Lin, F. and Zhu, J. (2012). Continuous-time proportional hazards regression for ecological monitoring data. Journal of Agricultural, Biological, and Environmental Statistics, 17, 163-175.
Reyes, P.E., Zhu, J., and Aukema, B.H. (2012). Selection of spatial-temporal lattice models: Assessing the impact of climate conditions on a mountain pine beetle outbreak. Journal of Agricultural, Biological, and Environmental Statistics, 17, 508-525.
Jin, C., Zhu, J., Steen-Adams, M.M., Sain, S., and Gangnon, R.E. (2013). Spatial multinomial regression models for nominal categorical data: A study of land cover in northern Wisconsin. Environmetrics, 24, 98-108.
Tracey, J.A., Zhu, J., Boydston, E., Lyren, L., Fisher, R.N., and Crooks, K.R. (2013). Mapping behavioral landscapes for animal movement: A finite mixture modeling approach. Ecological Applications, 23, 654-669.
Fu, R., Thurman, A.L., Chu, T., Steen-Adams, M.M., and Zhu, J. (2013). On estimation and selection of autologistic regression models via penalized pseudolikelihood. Journal of Agricultural, Biological, and Environmental Statistics, 18, 429-449.
Chu, T., Wang, H., and Zhu, J. (2014). On semiparametric inference of geostatistical models via local Karhunen-Loeve expansion. Journal of the Royal Statistical Society Series B, 76, 817-832.
Thurman, A.L. and Zhu, J. (2014). Variable selection for spatial Poisson point processes via a regularization method. Statistical Methodology, 17, 113-125.
Scientific Collaboration Publications:
Morgan, G.D., MacGuidwin, A.E., Zhu, J., and Binning, L.K. (2002). Root lesion nematode (Pratylenchus penetrans) population dynamics over a three-year crop rotation. Agronomy Journal, 94, 1146–1155.
Morgan, G.D., Stevenson, W.R., MacGuidwin, A.E., Kelling, K.A., Binning, L.K., and Zhu, J. (2002). Plant pathogen population dynamics in potato fields. Journal of Nematology, 34, 189–193.
Ingham, S.C., Vivio, L.L., Losinski, J.A., and Zhu, J. (2004). Manual shaking as an alternative to mechanical stomaching in preparing ground meats for microbiological analysis. Food Protection Trends, 24, 253–256.
Anderson, D.A., Turner, M.G., Forester, J.D., Zhu, J., Boyce, M.S., Beyer, H., and Stowell, L. (2005). Scale-dependent summer habitat use for reintroduced elk (Cervus canadensis) in Wisconsin, USA. Journal of Wildlife Management, 69, 298–310.
Ingham, S.C., Fanslau, M.A., Engel R., Breuer, J.R., Breuer, J.E., Wright, T.H., Reith-Rozelle, J.K., and Zhu, J. (2005). Evaluation of fertilization-to-planting and fertilizationto-harvest intervals for safe use of non-composted bovine manure in Wisconsin vegetable production. Journal of Food Protection, 68, 1134–1142.
Ingham, S.C., Engel, R.A., Fanslau, M.A., Schoeller, E.L., Searls, G.A., Buege, D.R., and Zhu, J. (2005). Fate of Staphylococcus aureus on vacuum-packaged ready-to-eat meat products stored at 21oC. Journal of Food Protection, 68, 1911–1915.
Magle, S.B., Zhu, J., and Crooks, K. (2005). Behavioral responses to repeated human intrusion by black-tailed prairie dogs (Cynomys Ludovicianus). Journal of Mammalogy, 86, 524–530.
Smithwick, E.A.H., Mack, M.C., Turner, M.G., Chapin III, F.S., Zhu, J., and Balser, T.C. (2005). Spatial heterogeneity of ecosystem processes after severe fire in a black spruce(Picea mariana) forest, Alaska. Biogeochemistry, 76, 517–537.
Aukema, B.H., Carroll, A.L., Zhu, J., Raffa, K.F., Sickley, T.A., and Taylor, S.W. (2006). Landscape level analysis of mountain pine beetle in British Columbia, Canada: Spatiotemporal development and spatial synchrony within the present outbreak. Ecography, 29, 427–441.
Algino, R.J., Ingham, S.C., and Zhu, J. (2007). Survey of antimicrobial effects of beef carcass intervention treatments in very small state-inspected slaughter plants. Journal of Food Science, 72, 173–179.
Ruby, J.R., Zhu, J., and Ingham, S.C. (2007). Using indicator bacteria and Salmonella spp. test results from three large-scale beef abattoirs over an 18-month period to evaluate intervention system efficacy and plan carcass testing for Salmonella spp. Journal of Food Protection, 70, 2732–2740.
Vander-Zanden, M.J., Joppa, L.N., Allen, B.C., Chandra, S., Gilroy, D., Hogan, Z., Maxted, J.T., and Zhu, J. (2007). Modeling spawning dates of Hucho taimen in Mongolia to establish fishery management zones. Ecological Applications, 17, 2281–2289.
Aukema, B.H., Carroll, A.L., Zheng, Y., Zhu, J., Raffa, K.F., Moore, R.D., and Stahl, K. (2008). Movement of outbreak populations of mountain pine beetle: Influence of spatiotemporal patterns and climate. Ecography, 31, 348–358.
Mu˜noz, G.R., Kelling, K.A., Rylant, K.E., and Zhu, J. (2008) Field evaluation of nitrogen availability from fresh and composted manure. Journal of Environmental Quality, 37, 944–955.
Qin, X., Han, J., and Zhu, J. (2009). Spatial analysis of road weather safety data using a Bayesian hierarchical modeling approach. Advances in Transportation Studies, 18, 69–78.
Aukema, B.H., Zhu, J., Møller, J., Rasmussen, J.G., and Raffa, K.F. (2010). Interactions between below- and above-ground herbivores drive a forest decline and gap-forming syndrome. Forest Ecology and Management, 259, 374–382.
Magle, S.B., Reyes, P., Zhu, J., and Crooks, K. (2010). Investigating local extinction, colonization, and habitat destruction for a keystone species in urban habitat. Biological Conservation, 143, 2146-2155.
Steen-Adams, M.M., Mladenoff, D.J., Langston,N.E., Liu, F., and Zhu, J. (2011). Influence of biophysical factors and differences in Ojibwe reservation versus Euro-American social histories on forest landscape change in northern Wisconsin, USA. Landscape Ecology, 26, 1165-1178.
Turner, M.G., Romme, W.H., Smithwick, E.A.H., Tinker, D.B., and Zhu, J. (2011). Variation in aboveground cover influences soil nitrogen availability at fine spatial scales following severe fire in subalpine conifer forests. Ecosystems, 14, 1081-1095.
Sambaraju, K.R., Carroll, A.L., Zhu, J., Moore, D., Stahl, K., and Aukema, B.H. (2012). Climate change could alter the distribution of mountain pine beetle outbreaks in western Canada. Ecography, 35, 211-223.
Curtis, K.J., Reyes, P.E., O'Connell, H., and Zhu, J. (2013). Assessing the spatial concentration and temporal persistence of poverty: Industrial structure, racial/ethnic concentration, and the complex links to poverty. Spatial Demography, 1, 178-194.
Bradbury, K.R., Borchardt, M.A., Gotkowitz, M., Spencer, S.K., Zhu, J., and Hunt, R.J. (2013). Source and transport of human enteric viruses in deep municipal water supply wells. Environmental Science and Technology, 47, 4096-4103.
Bosak, E.J., Seidl-Adams, I.H., Zhu, J., and Tumlinson, J.H. (2013). Maize developmental stage affects indirect and direct defense expression. Environmental Entomology, 42, 1309-1321.
Tracey, J.A., Sheppard, J., Zhu, J., Wei, F., Swaisgood, R.R., and Fisher, R.N. (201-4). Movement-based estimation and visualization of space use in 3D for wildlife ecology and conservation. PLoS ONE. Accepted for publication.
Lake, K.A., Zhu, J., Wang, H., Volckens, J., Koehler, K.A. (201-4) Effects of data sparsity and spatiotemporal variability on hazard maps of workplace noise. Journal of Occupational and Environmental Hygiene. Accepted for publication.
Stenglein, J.L., Zhu, J., Clayton, M.K., and Van Deelen, T.R. (201-4). Are the numbers adding up? Exploiting discrepancies among complementary population models. Accepted for publication.
Zhu, J. (2006). Review of “Statistical Methods for Spatial Data Analysis” by O. Schabenberger and C. A. Gotway. Journal of the American Statistical Association, 101, 389–390.
Zhu, J. (2013). Review of “Spatio-Temporal Heterogeneity: Concepts and Analyses” by P.R.L. Dutilleul. Biometrics, 69, 557-558.